All right. I finally got it working. Here's what you do. This is all in the mobile app. I have an iPhone, so have no idea if Android is different.
First go to the devices tab and add all of your devices you want to use in the activity. At minimum you will want your TV or Monitor, Apple TV, Windows Computer and either the Harmony Pro BT Apple TV 4 or the Harmony Pro BT Apple TV 5. Since I'm using an Apple TV 4K second release with tvOS 17, I used the Harmony Pro BT Apple TV 5. If you are on an older Apple TV or tvOS, you may need to use Harmony Pro BT Apple TV4 instead.
On the Activities screen, tap the Edit Activities button at the bottom of the screen.
Tap the Add Activity Button at the bottom of the screen.
After to connects to the Harmony Servers and checks the hub firmware, select Add your own Activity.
Enter a name for the activity in the edit box at the top and select an icon for the activity and tap the > button in the upper right corner of the screen.
Tap the boxes to the left of the devices you want in the activity you are creating, this puts a check in the box, and tap the > button in the upper right corner of the screen.
Tap the circle next to Watch PC selecting that radio button and window will change asking you to turn on your PC and BT Apple TV 5. Tap the > button in the upper right corner of the screen.
The activity will now run and and there will be a button at the bottom of the screen saying My Devices Are On. Click that button if everything turned on. If not, you will need to troubleshoot.
The next screen lists your devices in the activity that have inputs, go to each device and set the input for that device. After all are complete click the > button in the upper right corner of the screen.
The next screen asks if you can see and hear your content. If so, click the yes button. If not you will need to click no and troubleshoot.
Once you click yes, the activity will sync and save and you will return to the activities screen. Click the Edit Activities button at the bottom of the screen and click on the activity that you just created.
The summary screen will display for the activity. Towards the bottom of the page there is the connectivity option. Click on that option, and it will walk you through parting the windows computer through bluetooth to your Apple TV.
After completing all of this, you will have the number pad on the LCD screen, and it will work for channel input inside of the Channels app. Make sure to customize your remote on the Summary screen as well to set up the keys for the Apple TV since everything will be set up in the Windows computer configuration.